personal photo of Sathvik Anantakrishnan

Sathvik Anantakrishnan

Tagline:Biophysics PhD Student in the Tjian-Darzacq Lab at UC Berkeley

Berkeley, CA, USA

Education

  • PhD

    from: 2022, until: present

    Field of study:BiophysicsSchool:University of California, BerkeleyLocation:Berkeley, CA

    Tjian-Darzacq Lab

  • BS-MS

    from: 2017, until: 2022

    Field of study:Biological Sciences, Computational BiologySchool:Indian Institute of Technology, MadrasLocation:Chennai, India

    Protein Biophysics Lab

Research Interests

  • Transcription factors
  • Single-molecule tracking
  • Single-molecule footprinting
  • Non-equilibrium thermodynamics

Publications

  • bis (trifluoromethyl)-carborhodamines for live cell imaging

    Journal ArticlePublisher:ChemRxivDate:2024
    Authors:
    Nels GerstnerJack McCannJulia MartinKatharine HennKathrin RiskeSathvik AnantakrishnanThomas GrahamXavier DarzacqEvan Miller
    Link

  • Automated live-cell single-molecule tracking in enteroid monolayers reveals transcription factor dynamics probing lineage-determining function

    Journal ArticlePublisher:Cell ReportsDate:2024
    Authors:
    Nike WaltherSathvik AnantakrishnanThomas GW GrahamGina M DaileyRobert TjianXavier Darzacq
    Link

  • Thermodynamic architecture and conformational plasticity of GPCRs

    Journal ArticlePublisher:Nature CommunicationsDate:2023
    Authors:
    Sathvik AnantakrishnanAthi N Naganathan
    Link

  • Probing patterning in microbial consortia with a cellular automaton for spatial organisation

    Journal ArticlePublisher:Scientific ReportsDate:2022
    Authors:
    Sankalpa VenkatraghavanSathvik AnantakrishnanKarthik Raman
    Link

  • Comparative analysis of three studies measuring fluorescence from engineered bacterial genetic constructs

    Journal ArticlePublisher:PLOS OneDate:2021
    Authors:
    Jacob BealGeoff S BaldwinNatalie G FarnyMarkus GershaterTraci Haddock-AngelliRussell Buckley-TaylorAri DwijayantiDaisuke KigaMeagan LizarazoJohn Markenothers
    Link

  • pPerturb: A Server for Predicting Long-Distance Energetic Couplings and Mutation-Induced Stability Changes in Proteins via Perturbations

    Journal ArticlePublisher:ACS OmegaDate:2020
    Authors:
    Soundhararajan GopiDevanshu DevanshuNandakumar RajasekaranSathvik AnantakrishnanAthi N Naganathan
    Link

  • Robust estimation of bacterial cell count from optical density

    Journal ArticlePublisher:Communications BiologyDate:2020
    Authors:
    Jacob BealNatalie G FarnyTraci Haddock-AngelliVinoo SelvarajahGeoff S BaldwinRussell Buckley-TaylorMarkus GershaterDaisuke KigaJohn MarkenVishal Sanchaniaothers
    Link